Lab Automation Software Engineer
- Salary
- $175K - $235K
- Level
- Mid
- Work type
- Hybrid · San Francisco
Not stated in the posting: visa.
Open. First seen 2 October 2026.
About the role
Plasmidsaurus's standard text
About Plasmidsaurus
Plasmidsaurus is on a mission to accelerate new cures and promote a healthier planet by unlocking a new level of productivity for scientists. Our sequencing services are used daily by thousands of innovators, including Nobel laureates, Fortune 100 pharma, and over 70,000 scientists.
We began by revolutionizing plasmid sequencing, making it exponentially cheaper and faster, with innovative sequencing technologies and a global network of laboratories that turn samples into answers in hours, not weeks.
Now we are expanding that same disruptive model across all of genomics. With the launch of our new RNA-seq service, we are taking a bold step toward our vision to sequence everything, providing scientists everywhere with faster, simpler, and more affordable access to the data that powers discovery.
Every team member at Plasmidsaurus plays a crucial role in driving the future of biotech research. Together, we are building the world’s most efficient sequencing engine that operates overnight, scales globally, and helps scientists make breakthroughs faster than ever before.
Position Overview
Our automation team plays a pivotal role in delivering top quality data to our customers at unbeatable speeds. We are looking for a lab automation software engineer to join us on our mission to sequence everything. You will:
- Orchestrate and instrument our growing fleet of lab robotics.
- Create agentic tools that bridge RnD and lab automation, enabling scientists to answer questions faster than ever before.
- Write production-quality python code to integrate physical hardware with our custom LIMS and data pipeline.
- Collaborate with our world-class scientists and technicians to develop robust high throughput sample processing workflows.
- Build world class lab automation at one of the most exciting and dynamic companies in biotech.
Culture
You will excel if you are someone who:
- Is dissatisfied with scripting proprietary liquid handlers and schedulers.
- Builds new tools when existing software and hardware options are insufficient.
- Enjoys high agency and high ownership work.
- Is curious about learning from other people’s expertise in scientific/biological domains.
- Is excited to make an impact on the scientific community, enabling the next generation of medicines, biotechnology, and even plant-based-meats!
- Can lead projects from idea to production independently.
- Is a life-long learner.
- Values clear communication and helping others learn new skills.
Qualifications
- BS, MS, or PhD in Computer Science, Robotics, Biology, or relevant work experience
- 3+ years of experience programming in Python
- 3+ years of experience using modern web frameworks like Flask/Django
- 1 + yrs lab experience and familiarity with molecular biology protocols
- 1+ years of experience automating, optimizing and scaling lab procedures using liquid handling systems (OpenTrons, Hamilton, etc.) and lab robotics
- Experience with orchestration and deploying software to multiple devices in the field (e.g. Docker, Ansible)
- Experience with cloud platforms and infrastructure-as-code (e.g., AWS, Terraform)
- Experience with building & maintaining QA, telemetry, and monitoring systems for a fleet of physical hardware
- Experience working with Linux servers
- Experience with simple computer vision (e.g., OpenCV)
- (Preferred) Experience with 3D printing (e.g., Fusion 360) and basic CAD modeling
- (Preferred) Some experience with C# and .NET frameworks for scripting automation equipment
- (Preferred) Interest in learning about biotechnology and DNA sequence analysis
Why Plasmidsaurus?
- IMPACT: Your work will directly contribute to accelerating biotech research. This research is one of humanity’s most powerful tools for stopping climate change and developing novel therapies.
- INNOVATION: Work on the cutting edge of biotech and software, introducing indispensable tools to top-tier researchers.
- COMMUNITY: Join a passionate, resourceful team that values close, interactive relationships with our customers and each other.
Plasmidsaurus's standard text
We encourage you to apply even if your experience doesn't perfectly align with the job description as we seek out diverse and creative perspectives. Team members who love to learn and collaborate in an inclusive environment will thrive with us. We are an equal opportunity employer and do not discriminate on the basis of race, religion, color, national origin, gender, sexual orientation, age, marital status, veteran status, or disability status. If you need additional accommodations to feel comfortable during your interview process, please let us know at careers@plasmidsaurus.com.
What this role asks for
Particular to this role
.NET · C# · Computer Vision · Django · Docker · Flask
Rare in Plasmidsaurus's other 10 open postings.
Standard for software engineering roles
Python
Common in software engineering postings at any company.
62% of this description is written for the role. The rest is Plasmidsaurus's standard text, folded away below.
Read against Plasmidsaurus's other open postings on this site.
The team: Engineering HIRES STEADILY
This role is one of 6 open in Engineering. 5 were posted in the last 30 days and the oldest in April: a team that hires all year rather than one being built.
WHAT THE TEAM WORKS WITH, ACROSS ITS POSTINGS
Python (5 of 6), Ansible (4 of 6), Linux (4 of 6), Terraform (4 of 6), AWS (3 of 6), Django (2 of 6), Flask (2 of 6)
OTHER ROLES ON THIS TEAM
- Senior Platform Engineer | Lab Infrastructure and Security posted Oct 10
- Senior IT Engineer posted Oct 8
- Product Manager | Software posted Oct 3
- Lab Robotics Research Associate posted Sep 24
- Platform Engineering Lead | AI Infra posted Apr 28
From the team and dates on Plasmidsaurus's own job board.
See Software Engineer salaries in San Francisco →
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